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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945217.1_cds_XP_016487784.1_78490
CDS Infomation

[gene=LOC107807857] [db_xref=GeneID:107807857] [protein=E3 ubiquitin-protein ligase SINAT5-like isoform X3] [protein_id=XP_016487784.1] [location=complement(join(69987..69992,70843..71046,72649..73035,73880..74089))] [gbkey=CDS]
Sequence

ATGGCAACTGGAAGTCCTTATTTTGATGACTTGCGATGTCAATCTGAGGTCATTAATCCT
CCACGAAATGAAGACTGCACAGACATTGGTGAACATATGAATGAGCTTGCTCAGCATACA
ACAAAACCTAATGCGACTGTTTCTAGTAGTGTTCGTGAATTATTGGAATGCCCAGTGTGC
TTAAATGCTATGTATCCACCCATTCATCAGTGTTCCAACGGTCACACACTGTGTTCTGGT
TGCAAACCTAGGGTGCATAATCGCTGTCCAACATGTCGGCATGAGCTTGGTAATATTCGA
TGCCTTGCATTAGAGAAGGTTGCTGCATCTCTTGAGCTCCCATGTAAATATCAGAGCTTT
GGATGTATAGGAATCATTCCTTACTACAGCAAGCTGAAGCACGAATCTGAATGCTCTTTC
AGACCCTATAATTGCCCCTATGCTGGCTCAGAGTGCACCGTCATTGGCGACATCCCATAT
TTAGTTGCCCATTTGAAAGATGATCACAAAGTTGATATGCATGTCGGCAGTACTTTCAAT
CATCGTTATGTAAAAGCAAATCCCCATGAAGTGGAAAATGCTACATGGATGCTTACTGTT
TTCAGTTGCTTTGGTCAGTACTTCTGTTTACACTTTGAAGCATTTCAACTTGGAATGGCA
CCAGTTTATATTGCATTTTTACGGTTCTTGGGTGATGATGAAACGGCAAAGAACTTTAGC
TACAGTCTTGAAGTTGGAGGCAATGGAAGGAAGATGATTTGGCAAGGGGTACCAAGAAGC
GTTAGGGACAGTCACCGTAAGTTGTAG

Peptide Sequence

PEP ID

XP_016487784.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase SINAT5-like isoform X3 [Nicotiana tabacum]
Sequence

MATGSPYFDDLRCQSEVINPPRNEDCTDIGEHMNELAQHTTKPNATVSSSVRELLECPVC
LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSF
GCIGIIPYYSKLKHESECSFRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHVGSTFN
HRYVKANPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFLGDDETAKNFS
YSLEVGGNGRKMIWQGVPRSVRDSHRKL

Transcript Sequence

Gene sequence data has not been registered.